Bioconductor logo
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • Collections
  • Learning paths

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly4
    • Sequence assembly4
    • Biodiversity2
    • Biological sequences2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Sequence analysis2
    • Sequence databases2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Data clean-up1
    • Data cleaning1
    • Data integrity1
    • Data quality1
    • Data quality management1
    • Low complexity sequences1
    • Nucleic acid repeats1
    • Protein repeats1
    • Protein sequence repeats1
    • Repeat sequences1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence repeats1
    • Show N_FILTERS more
    • Tool
    • Galaxy6
    • BUSCO3
    • QUAST3
    • Cutadapt2
    • FASTQE2
    • FastQC2
    • Merqury2
    • NanoPlot2
    • pycoQC2
    • BEDTools1
    • Flye1
    • RED1
    • RepeatMasker1
    • RepeatModeler1
    • Show N_FILTERS more
    • Content provider
    • GTN7
    • Show N_FILTERS more
    • Keyword
    • Assembly4
    • biodiversity3
    • Sequence analysis2
    • assembly2
    • Genome Annotation1
    • deutsch1
    • español1
    • eukaryote1
    • italiano1
    • pacbio1
    • quality control1
    • Show N_FILTERS more
    • Competency level
    • Beginner5
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students7
    • Show N_FILTERS more
    • Author
    • Helena Rasche128
    • Bérénice Batut111
    • SIB Swiss Institute of Bioinformatics111
    • Saskia Hiltemann67
    • The Carpentries Incubator64
    • Björn Grüning50
    • The Gulbenkian Training Programme in Bioinformatics36
    • bioinformatics.ca35
    • Simon Gladman33
    • Donat Agosti29
    • Julia Giora29
    • Plazi Verein29
    • Yvan Le Bras29
    • Anthony Bretaudeau28
    • Anton Nekrutenko28
    • Nate Coraor27
    • bebatut27
    • Subina Mehta26
    • John Chilton25
    • Nicola Soranzo25
    • The Carpentries25
    • bgruening25
    • Saskia Lawson-Tovey24
    • Egon Willighagen22
    • NBIS - National Bioinformatics Infrastructure Sweden22
    • Anne Fouilloux21
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • posit-conf-202321
    • Coding for Reproducible Research Initiative19
    • Data Carpentry19
    • Marie Josse19
    • Wendi Bacon19
    • posit::conf(2024)19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Laura Cooper18
    • Terri Attwood18
    • UC Davis Bioinformatics Core Training Page18
    • Mehmet Tekman17
    • Teaching materials at the Harvard Chan Bioinformatics Core17
    • Wandrille Duchemin17
    • Paul Zierep16
    • Cristóbal Gallardo15
    • Martin Morgan15
    • Samaha, Georgina15
    • Sergio Martínez Cuesta15
    • Maria Doyle14
    • Mijke Jetten14
    • Pratik Jagtap14
    • CRUK CI Bioinformatics Core13
    • Dave Clements13
    • Delphine Lariviere13
    • Donny Vrins13
    • Fred Hutch Data Science Lab13
    • Julia Jakiela13
    • Monique Zahn13
    • Wolfgang Maier13
    • shiltemann13
    • Andrew Mason12
    • Anup Kumar12
    • Celia van Gelder12
    • James Johnson12
    • Katherine Do12
    • Marius van den Beek12
    • Melanie Föll12
    • Patricia Palagi12
    • Personalized Health Informatics Group12
    • Simon Bray12
    • nekrut12
    • Khaled Jum'ah11
    • Pavankumar Videm11
    • Sundeep Agarwal11
    • Alexander Botzki10
    • Canadian Bioinformatics Workshops10
    • Daniel Blankenberg10
    • Geert van Geest10
    • Martin Čech10
    • Paul Yorke10
    • Allegra Via9
    • Anika Erxleben9
    • Avans Hogeschool9
    • ELIXIR Estonia9
    • Lucille Delisle9
    • MolSSI Education9
    • Praveen Kumar9
    • allegra.via Via9
    • rstudio::conf(2022)9
    • Anne Pajon8
    • Diana Chiang Jurado8
    • Diana Pilvar8
    • Emma Leith8
    • Gildas Le Corguillé8
    • Helen Brown8
    • Joachim Wolff8
    • Kaivan Kamali8
    • Maria Levchenko8
    • Matthias Fahrner8
    • Robert Andrews8
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau7
    • Cristóbal Gallardo7
    • Helena Rasche7
    • Saskia Hiltemann7
    • Alexandre Cormier5
    • Björn Grüning5
    • Bérénice Batut5
    • Stéphanie Robin3
    • Laura Leroi2
    • Mateo Boudet2
    • Nicola Soranzo2
    • Simon Bray2
    • Swathi Nataraj2
    • William Durand2
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anup Kumar1
    • Erwan Corre1
    • Jonathan Kreplak1
    • Maria Doyle1
    • Matthias Bernt1
    • Natalie Kucher1
    • Niall Beard1
    • Solenne Correard1
    • Teresa Müller1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • slides3
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows6
    • Associated Training Datasets5
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Register training material

Authors: Alexandre Cormier

and Across all spaces: true

7 materials found
  • e-learning

    Genome Assembly Quality Control

    •• Intermediate
    Sequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control
  • slides

    Genome assembly quality control.

    • Beginner
    Sequence assembly Assembly
  • e-learning

    Masking repeats with RepeatMasker

    • Beginner
    Genomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote
  • e-learning

    Genome assembly using PacBio data

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio
  • slides

    An introduction to get started in genome assembly and annotation

    • Beginner
    Sequence assembly Assembly
  • e-learning

    Quality Control

    • Beginner
    Sequence analysis Sequence analysis deutsch español italiano
  • slides

    Quality Control

    • Beginner
    Sequence analysis Sequence analysis
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.