Materials - Bioconductor

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- Data management planning3
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- Peptide database search2
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- Alignment1
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- DESeq25
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- DropletUtils3
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- RDA DMP Common Standard for Machine-Actionable Data Management Plans2
- STRING: functional protein association networks2
- Search Tool for Interactions of Chemicals2
- The European Genome-phenome Archive2
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- eNanoMapper Ontology2
- Wheat Data Interoperability Guidelines 1
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- BcForms Grammar1
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- Stress Knowledge Map1
- Structural Classification Of Proteins1
- The FAIR Principles1
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- Hochschule140
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- RNA-seq128
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- synchron93
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- Apache License 2.020
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- CeCILL Free Software License Agreement v2.13
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- Target audience
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- health professionals13
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- beamtime users, researchers, PhD students13
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- Master students12
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- healthcare professionals12
- software developers, bioinformaticians12
- Biomedical Researchers11
- biocurators11
- Life scientists10
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- Beginner9
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- computational scientists6
- plant researchers6
- General Interest5
- crystallography5
- genomics researchers5
- neutron community5
- postdocs5
- postgrad5
- researchers5
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Biologists with little or no prior computational experience4
- Curators4
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- PI4
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members4
- Postgraduate students4
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- archaeologists4
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- postdoctoral researchers4
- project manager4
- spectroscopy4
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- Simon Gladman37
- The Gulbenkian Training Programme in Bioinformatics36
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- Julia Giora29
- Plazi Verein29
- Yvan Le Bras29
- Anthony Bretaudeau28
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- Nate Coraor27
- Subina Mehta27
- John Chilton25
- Nicola Soranzo25
- Teaching materials at the Harvard Chan Bioinformatics Core25
- The Carpentries25
- Saskia Lawson-Tovey24
- Egon Willighagen22
- NBIS - National Bioinformatics Infrastructure Sweden22
- Anne Fouilloux21
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- Michelle Brazas21
- posit-conf-202321
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- Data Carpentry19
- Marie Josse19
- Wendi Bacon19
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- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Laura Cooper18
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- Wandrille Duchemin18
- András Aszódi17
- Mehmet Tekman17
- Sergio Martínez Cuesta17
- shiltemann17
- Paul Zierep16
- Cristóbal Gallardo15
- Samaha, Georgina15
- Alexander Botzki14
- Julia Jakiela14
- Maria Doyle14
- Mijke Jetten14
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- Delphine Lariviere13
- Donny Vrins13
- Fred Hutch Data Science Lab13
- James Johnson13
- Katherine Do13
- Monique Zahn13
- Wolfgang Maier13
- Andrew Mason12
- Anup Kumar12
- Celia van Gelder12
- Jenny Drnevich @jenny12
- Marius van den Beek12
- Melanie Föll12
- Patricia Palagi12
- Personalized Health Informatics Group12
- Simon Andrews12
- Simon Bray12
- Allegra Via11
- Geert van Geest11
- Khaled Jum'ah11
- Mathieu Bourgey11
- Pavankumar Videm11
- Sundeep Agarwal11
- Various11
- Canadian Bioinformatics Workshops10
- Daniel Blankenberg10
- Eija Korpelainen10
- Martin Čech10
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- Avans Hogeschool9
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- Lucille Delisle9
- MolSSI Education9
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- Nicola Soranzo180
- Martin Čech129
- Anthony Bretaudeau108
- Cristóbal Gallardo104
- Niall Beard90
- Toby Hodges83
- Wendi Bacon77
- Nate Coraor70
- François Michonneau69
- Armin Dadras66
- Erin Becker63
- Gildas Le Corguillé63
- Marius van den Beek62
- William Durand59
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Robert Andrews55
- Katrin Leinweber54
- Raniere Silva54
- Simon Gladman54
- Tracy Teal53
- W. Trevor King52
- Andy Boughton51
- maneesha51
- Beatriz Serrano-Solano49
- Katie Anne Mills48
- Maxim Belkin48
- Pavankumar Videm48
- Teresa Müller48
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras45
- David Pérez-Suárez44
- Gabriel A. Devenyi44
- Canadian Bioinformatics Workshops43
- Munazah Andrabi43
- Abby Cabunoc Mayes42
- EvanWill42
- Ian Lee42
- Jon Pipitone42
- Jonah Duckles42
- Michael Hansen42
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- Brandon Curtis41
- David Mawdsley41
- Greg Wilson41
- Jemma Stachelek41
- Remi Rampin41
- Allen Lee40
- Andrew Sanchez40
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- Rémi Emonet38
- William L. Close38
- Rayna M Harris37
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- Wolfgang Maier36
- Melanie Föll35
- Sarah Brown35
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- Anup Kumar33
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- Stephan Druskat29
- Christina K.28
- Simon Bray28
- Subina Mehta28
- Alex Whan27
- Anne Fouilloux26
- Paula Andrea Martinez26
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- Geert van Geest24
- João Rodrigues24
- Peter van Heusden24
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- Robert Davey22
- Sarah Stevens22
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- Wolmar Nyberg Åkerström21
- actions-user21
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- Hilmar Lapp20
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- lessons59
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- course materials29
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- slides / presentation1
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- Related resource
- Associated Training Datasets333
- Associated Workflows309
- Jupyter Notebook (with Solutions)54
- Jupyter Notebook (without Solutions)54
- Input datasets34
- Research Data Management in Life Sciences11
- Associated slides9
- Slides7
- The Carpentries7
- 2nd PaN EOSC Symposium6
- Development in Galaxy slides6
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- DMPonline3
- Data Stewardship Wizard3
- Workshop recording3
- ChIP-Seq data analysis dataset2
- DisProt2
- Epigenetics dataset2
- Galaxy Server administration slides2
- Genome Annotation dataset2
- Metagenomics dataset2
- OpenCloning2
- Recoding2
- Sequence analysis slides2
- pydna2
- ARROWSMITH1
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Booklet of presentations1
- COBRA Toolbox1
- CanCOGeN1
- Chipster1
- Colloquia list1
- Contributing to the Galaxy Training Material slides1
- DMPortal1
- Data Visualisation (theory) 1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Documentation1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- ENA1
- Event1
- FAIR for busy biologists1
- FAIR in (biological) practice1
- FAIRplus FAIRification wizard1
- GEEM1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Galaxy project guided tours1
- Genome Annotation slides1
- Genomics England PanelApp1
- GitHub1
- HoloFood Project1
- ICAT search API implementation1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- Jupyter Notebook1
- MGnify1
- McStas1
- MetaboLights1
- MobiDB1
- Next generation biobanking ontology (NGBO)1
- OpenRefine1
- Overview of the Symposium1
- Part 101
- Part 2a1
- Part 2b1
- Part 31
- Part 41
- Part 51
- Part 61
- Part 71
- Part 81
- Part 91
- Public Health Alliance for Genomic Epidemiology1
- R basics1
- RDMkit1
- REPET image Docker1
- RNA-seq data package1
- Ready For BioData Management?1
- Reference search API implementation1
- SciCat search API implementation1
- Scientific article1
- Slides for Introduction to statistics with R 1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- TELBE workflow1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
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- PHENotyping and EnviroTyping (PHENET training collection)20
- ELIXIR Biodiversity Community19
- PINK project18
- RDMbites: REDCap18
- HemaFAIR Training: Applying FAIR Principles in Hematology Research16
- RDMbites: Data management essentials13
- ELIXIR Toxicology Community11
- RDMbites: Image data11
- ELIXIR SIS-Containers - collection of training materials10
- ELIXIR Federated Human Data Community9
- ELIXIR Systems Biology Community: training events and materials9
- RDMbites: Sequencing data9
- Elements of Data Management7
- Byte-sized RSE series5
- RDMbites: Sensitive data5
- SARS-CoV-2 : Studying a new virus5
- RDMbites: Equality, Diversity, Inclusion and Justice in RDM4
- Single-cell Omics Community - collection of courses and materials4
- VEIS - Value of the EGA for Industry and Society4
- Impact of research infrastructures2
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