Training materials
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ELIXIR TeSS
Graylab/DL4Proteins-notebooks
Machine learning Protein structure Python Machine learning Artificial intelligence
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ELIXIR TeSS
e-learning
Neoantigen 1a: Fusion-Database-Generation
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Neoantigen 3: PepQuery2 Verification
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Neoantigen 4: Variant Annotation
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Neoantigen 2: Database merge and FragPipe discovery
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Neoantigen 5b: IEDB binding Validated Neopeptides
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Neoantigen 5a: Predicting HLA Binding
• BeginnerProteomics Proteomics label-free -
ELIXIR TeSS
scottmreed/molecular_informatics
Data visualisation Python Data science Data visualization
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ELIXIR TeSS
Sydney-Informatics-Hub/hello-nextflow
Nextflow
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ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome