Training materials
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ELIXIR TeSS
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
ELIXIR TeSS
e-learning
Pathway analysis with the MINERVA Platform
•• IntermediateTranscriptomics Transcriptomics bulk cyoa rna-seq viz -
ELIXIR TeSS
e-learning
Phylogenetics - Back to basics
•• IntermediateEvolutionary biology Evolution evolution phylogenetics -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy
• BeginnerMIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat
• BeginnerMIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
ELIXIR TeSS
e-learning
Clinical Metaproteomics 4: Quantitation
• BeginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
ELIXIR TeSS
e-learning
Clinical Metaproteomics 3: Verification
• BeginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
ELIXIR TeSS
e-learning
Clinical Metaproteomics 5: Data Interpretation
• BeginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
ELIXIR TeSS
e-learning
Clinical Metaproteomics 1: Database-Generation
• BeginnerMetagenomics Microbial ecology Microbiome label-TMT11