TeSSHub

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Genome annotation202
- Exomes181
- Genomes181
- Genomics181
- Personal genomics181
- Synthetic genomics181
- Viral genomics181
- Whole genomes181
- Comparative transcriptomics180
- Transcriptome180
- Transcriptomics180
- R153
- R program153
- R script153
- Python138
- Python program138
- Python script138
- py138
- Bayesian methods129
- Biostatistics129
- Descriptive statistics129
- Gaussian processes129
- Inferential statistics129
- Markov processes129
- Multivariate statistics129
- Probabilistic graphical model129
- Probability129
- Statistics129
- Statistics and probability129
- Algorithms118
- Computer programming118
- Data structures118
- Programming languages118
- Software development118
- Software engineering118
- MicroRNA sequencing117
- RNA sequencing117
- RNA-Seq117
- RNA-Seq analysis117
- Small RNA sequencing117
- Small RNA-Seq117
- Small-Seq117
- Transcriptome profiling117
- WTSS117
- Whole transcriptome shotgun sequencing117
- miRNA-seq117
- Chromosome walking104
- Clone verification104
- DNA-Seq104
- DNase-Seq104
- High throughput sequencing104
- High-throughput sequencing104
- NGS104
- NGS data analysis104
- Next gen sequencing104
- Next generation sequencing104
- Panels104
- Primer walking104
- Sanger sequencing104
- Sequencing104
- Targeted next-generation sequencing panels104
- Data management99
- Metadata management99
- Research data management (RDM)99
- Active learning90
- Ensembl learning90
- Kernel methods90
- Knowledge representation90
- Machine learning90
- Neural networks90
- Recommender system90
- Reinforcement learning90
- Supervised learning90
- Unsupervised learning90
- FAIR data85
- Findable, accessible, interoperable, reusable data85
- Metagenomics73
- Shotgun metagenomics73
- Single-cell genomics60
- Single-cell sequencing60
- Data rendering56
- Data visualisation56
- Antimicrobial stewardship55
- Medical microbiology55
- Microbial genetics55
- Microbial physiology55
- Microbial surveillance55
- Microbiological surveillance55
- Microbiology55
- Molecular infection biology55
- Molecular microbiology55
- Bottom-up proteomics54
- Discovery proteomics54
- MS-based targeted proteomics54
- MS-based untargeted proteomics54
- Metaproteomics54
- Peptide identification54
- Protein and peptide identification54
- Proteomics54
- Quantitative proteomics54
- Show N_FILTERS more
- Tool
- Galaxy368
- FastQC35
- SAMtools26
- MultiQC25
- Bioconductor23
- BWA21
- BEDTools16
- fastp16
- scikit-learn16
- JBrowse15
- SCANPY15
- Falco14
- DeepTools13
- BLAST12
- Cutadapt12
- QUAST12
- ggplot212
- BUSCO11
- Galaxy Image Analysis11
- GEMINI10
- STAR10
- scikit-image10
- taxonomy_krona_chart10
- NanoPlot9
- Trimmomatic9
- Bandage8
- FASTX-Toolkit8
- FreeBayes8
- BCFtools7
- BamTools7
- msConvert7
- seqtk7
- Biopython6
- Flye6
- HISAT26
- MAFFT6
- MaxQuant6
- RStudio6
- Trim Galore6
- Unicycler6
- Workflow4Metabolomics6
- gffread6
- Galactic Circos5
- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Open Babel5
- RSeQC5
- SRA Software Toolkit5
- anndata5
- annotatemyids5
- compute_sequence_length5
- kraken25
- xcms5
- Bowtie 24
- Bwa-mem24
- CellProfiler4
- DESeq24
- Diamond4
- GOseq4
- KrakenTools4
- MACS4
- MSstats4
- Merqury4
- Newick Utilities4
- Salmon4
- StringTie4
- UniProt4
- bx-python4
- gffcompare4
- mothur4
- snpEff4
- Apollo3
- Bakta3
- Bracken3
- Cardinal3
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- The Protein Data Bank (PDB)3
- UCSC Genome Browser Utilities3
- Vcflib3
- dRep3
- export2graphlan3
- gfastats3
- humann3
- iqtree3
- lofreq3
- pyGenomeTracks3
- snippy3
- Bio3D2
- Show N_FILTERS more
- Standard database or policy
- NCBI Gene4
- HumanMine1
- Integrated resource of protein families, domains and functional sites1
- PRINTS1
- Show N_FILTERS more
- Content provider
- PaN Training6686
- Glittr.org816
- GTN793
- European Bioinformatics Institute (EBI)466
- ERGA Knowledge Hub128
- GOBLET104
- Australian BioCommons83
- SIB Swiss Institute of Bioinformatics82
- Software Carpentry70
- Bioconductor44
- Khan Academy Statistics32
- BY-COVID25
- Canadian Bioinformatics Workshops25
- IFB French Institute of Bioinformatics20
- VIB Training & Conferences20
- Coding for Reproducible Research (CfRR)19
- Bioschemas9
- Data Carpentry9
- Coursera8
- eNanoMapper8
- InterMine4
- Danish National Health Data Science Sandbox3
- NanoCommons2
- BioData.pt1
- ELIXIR1
- proteomicsML1
- Show N_FILTERS more
- Keyword
- R340
- Python251
- hbovpk224
- Hochschuldidaktik218
- Hochschullehre193
- QUADIS172
- Transcriptomics149
- Hochschule140
- Genomics135
- Didaktik134
- Seminar130
- Elementar+123
- Kursmaterial122
- Next generation sequencing115
- RNA-seq113
- Workshop109
- Vorlage107
- asynchron107
- biodiversity106
- Template104
- Barrierefreiheit103
- Data management101
- Onlinelehre101
- FAIR data94
- blended learning93
- synchron93
- Profilehreplus88
- CHE86
- Data science85
- Bioinformatics84
- jupyter-notebook84
- digital gestützte Lehre82
- Statistics81
- microgalaxy80
- OER79
- Educación física77
- Lehre77
- Machine learning77
- Entrenamiento70
- Reproducibility69
- Galaxy Server administration68
- HBOVPK65
- Verpleegkunde65
- gaming64
- Spiel (Spielen, Spiele)62
- Unix/Linux62
- Behinderung (Behinderungen)61
- Single-cell sequencing59
- FAIR58
- Open educational Resources58
- Bereich A Lehr-Lern-Konzepte57
- maan kasvukunto57
- Digitalisierung (Digitale Transformation, Digitaler Wandel)56
- Blended Learning55
- Data visualization54
- Jukka Rajala54
- work-in-progress54
- Foundations of Data Science52
- ProfiLehrePlus52
- E-Learning (Learning on demand, Digitales Lernen)51
- HU51
- Version control51
- Open Science50
- HAN49
- Proteomics49
- Studiehandleiding49
- Workflows49
- Steckbrief48
- Variant analysis48
- Deporte47
- luomu47
- Digitalisierung46
- Development in Galaxy45
- HSLeiden44
- Salud44
- Statistics and machine learning44
- Bildung43
- Genome assembly42
- Single Cell42
- training42
- programming41
- Digitale Lehre40
- Zorgverlener40
- luomutuotanto40
- Weiterbildung39
- avans39
- workshop38
- Digitale Spiele37
- ICF37
- Medienpädagogik37
- Actividad física36
- Digital gestützte Lehre36
- General36
- Genome annotation36
- Inklusion36
- tietokortit36
- Kommunikation35
- higher education35
- interactive-tools35
- Wissenschaftsmanagement34
- Show N_FILTERS more
- Competency level
- Not specified8641
- Beginner649
- Intermediate151
- Advanced20
- Show N_FILTERS more
- Licence
- License Not Specified3186
- Creative Commons Attribution 4.0 International2270
- Creative Commons Attribution Share Alike 4.0 International1663
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International779
- Creative Commons Attribution Non Commercial Share Alike 4.0 International679
- Creative Commons Attribution Non Commercial 4.0 International357
- Creative Commons Attribution No Derivatives 4.0 International246
- MIT License125
- Creative Commons Zero v1.0 Universal72
- GNU General Public License v3.0 only47
- BSD 3-Clause "New" or "Revised" License16
- Apache License 2.015
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- Do What The F*ck You Want To Public License1
- The Unlicense1
- Show N_FILTERS more
- Target audience
- Students543
- PhD students140
- Clinicians120
- Galaxy Administrators113
- Instructors52
- Novice44
- Intermediate26
- Researchers19
- Bench biologists16
- Biologists16
- Biologists, Genomicists, Computer Scientists16
- post-docs16
- beginner bioinformaticians14
- Beginners13
- beamtime users, researchers, PhD students13
- Graduate Students12
- Post-Doctoral Fellows12
- bioinformaticians9
- scientists9
- Life scientists8
- Life Science Researchers7
- PaN Community7
- biocurators7
- Photon Community6
- Life scientists with programming skills5
- PhD5
- crystallography5
- neutron community5
- General Interest4
- Laboratory technicians4
- Scientific community4
- Trainers4
- Veterinarians4
- archaeologists4
- biologists4
- material scientists4
- postgrad4
- spectroscopy4
- ExPaNDS and PaNOSC project members3
- PhD Students3
- life scientists3
- postdoc3
- research data scientist3
- Beginner2
- Chemists2
- Life Scientists2
- Materials scientists2
- PaN users2
- Physicists2
- Postgraduate students2
- Scientists2
- Undergraduate students2
- biology and bioinformatics sophomore undergraduates2
- data stewards2
- diffraction2
- imaging2
- postdocs2
- software developers, bioinformaticians2
- Anyone wants to start using the Unix/Linux OS1
- Bachelor students1
- Beginner informatics1
- Bioinformatician1
- Bioinformatics1
- Biomedical researchers1
- Clinical Scientists1
- Educators1
- High School Students1
- Lecturers1
- Life sciences1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- Master students1
- Ontologists1
- Post Docs1
- Postdoctoral researchers1
- Prospective and existing trainers1
- Researcher1
- Structural Biologists1
- Technicians1
- Training Designers1
- Training instructors1
- University and College Level Students1
- Users1
- adults1
- beginner1
- computational scientists1
- data curator1
- data managers1
- early stage phytopathogen researchers1
- engineers1
- experimeintal biologist researchers1
- field biologist researchers1
- general public1
- geneticists1
- healthcare professionals1
- high school1
- master1
- medical researchers1
- paleontologists1
- plant researchers1
- postdoctoral researchers1
- Show N_FILTERS more
- Author
- Helena Rasche128
- Bérénice Batut111
- SIB Swiss Institute of Bioinformatics111
- Saskia Hiltemann66
- The Carpentries Incubator64
- Björn Grüning49
- bioinformatics.ca35
- Simon Gladman33
- Yvan Le Bras29
- Anthony Bretaudeau28
- Anton Nekrutenko28
- Nate Coraor27
- bebatut27
- Subina Mehta26
- John Chilton25
- Nicola Soranzo25
- The Carpentries25
- bgruening25
- NBIS - National Bioinformatics Infrastructure Sweden22
- Anne Fouilloux21
- Fotis E. Psomopoulos21
- Michelle Brazas21
- posit-conf-202321
- Coding for Reproducible Research Initiative19
- Data Carpentry19
- Marie Josse19
- The Gulbenkian Training Programme in Bioinformatics19
- Wendi Bacon19
- posit::conf(2024)19
- Bazante Sanders18
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- Mehmet Tekman17
- Teaching materials at the Harvard Chan Bioinformatics Core17
- Paul Zierep16
- Wandrille Duchemin16
- Cristóbal Gallardo15
- Martin Morgan15
- Samaha, Georgina15
- Pratik Jagtap14
- CRUK CI Bioinformatics Core13
- Dave Clements13
- Delphine Lariviere13
- Donny Vrins13
- Fred Hutch Data Science Lab13
- Maria Doyle13
- Wolfgang Maier13
- shiltemann13
- Anup Kumar12
- James Johnson12
- Katarzyna Kamieniecka12
- Katherine Do12
- Krzysztof Poterlowicz12
- Marius van den Beek12
- Melanie Föll12
- Simon Bray12
- nekrut12
- Pavankumar Videm11
- Sundeep Agarwal11
- Canadian Bioinformatics Workshops10
- Daniel Blankenberg10
- Geert van Geest10
- Julia Jakiela10
- Khaled Jum'ah10
- Martin Čech10
- Anika Erxleben9
- Avans Hogeschool9
- ELIXIR Estonia9
- Lucille Delisle9
- MolSSI Education9
- Praveen Kumar9
- allegra.via Via9
- rstudio::conf(2022)9
- Anne Pajon8
- Diana Chiang Jurado8
- Emma Leith8
- Joachim Wolff8
- Kaivan Kamali8
- Patricia Palagi8
- Sergio Martínez Cuesta8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alex Ostrovsky7
- Alexandre Cormier7
- Allegra Via7
- Anna Syme7
- Beecroft, Sarah7
- Biocore@CRG7
- Bioinformatics, Rockefeller University7
- Christopher Barnett7
- Erwan Corre7
- Florian Christoph Sigloch7
- Gildas Le Corguillé7
- Jeremy Goecks7
- Junhao Qiu7
- Laura Leroi7
- Leonid Kostrykin7
- Matthias Fahrner7
- Michael Charleston7
- Nadia Goué7
- Show N_FILTERS more
- Contributor
- Saskia Hiltemann588
- Helena Rasche496
- Björn Grüning425
- Bérénice Batut261
- Nicola Soranzo180
- Martin Čech129
- Anthony Bretaudeau108
- Cristóbal Gallardo104
- Niall Beard90
- Toby Hodges82
- Wendi Bacon73
- Nate Coraor70
- François Michonneau68
- Armin Dadras66
- Gildas Le Corguillé63
- Erin Becker62
- Marius van den Beek62
- William Durand59
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Simon Gladman54
- Katrin Leinweber53
- Tracy Teal53
- Raniere Silva52
- W. Trevor King51
- maneesha51
- Andy Boughton50
- Pavankumar Videm48
- Teresa Müller48
- Katie Anne Mills47
- Maxim Belkin47
- Beatriz Serrano-Solano46
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras45
- Canadian Bioinformatics Workshops43
- David Pérez-Suárez43
- Gabriel A. Devenyi43
- Abby Cabunoc Mayes41
- EvanWill41
- Ian Lee41
- Jon Pipitone41
- Jonah Duckles41
- Michael Hansen41
- Piotr Banaszkiewicz41
- Brandon Curtis40
- David Mawdsley40
- Greg Wilson40
- Jemma Stachelek40
- Remi Rampin40
- Allen Lee39
- Andrew Sanchez39
- Michael R. Crusoe39
- James Allen38
- Jeff Oliver38
- Joel Nothman38
- Nick Young38
- Rémi Emonet38
- naught10138
- Rayna M Harris37
- William L. Close37
- Marie Josse36
- Wolfgang Maier36
- Melanie Föll35
- Sarah Brown35
- Anup Kumar33
- Gerard Capes33
- Maria Doyle33
- Renato Alves31
- trk30
- Ana Conrado29
- Stephan Druskat29
- Christina K.28
- K.E. Koziar28
- Subina Mehta28
- Alex Whan27
- Simon Bray27
- Anne Fouilloux26
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Peter van Heusden24
- Donny Vrins23
- Geert van Geest23
- Robert Davey22
- Sarah Stevens22
- actions-user21
- Henry Schreiner20
- Hilmar Lapp20
- Julia Jakiela20
- Bazante Sanders19
- The Gulbenkian Training Programme in Bioinformatics19
- Tristan Reynolds19
- Anton Nekrutenko18
- Leonid Kostrykin18
- Paola Prieto18
- C. Titus Brown17
- Deepti Varshney17
- Paul Zierep17
- Show N_FILTERS more
- Resource type
- e-learning666
- Recorded webinar301
- slides191
- Tutorial65
- Course materials47
- tutorial46
- video44
- hands-on tutorial27
- exercise25
- service22
- Video20
- Slides15
- Book7
- lessons6
- Talk5
- Lesson4
- Presentation3
- documenation3
- Poster2
- Training materials2
- jupyter notebook2
- online tutorial2
- Document1
- Documentation1
- E-Learning1
- Jupyter notebooks1
- Online tutorial1
- ViralZone1
- e-Learning1
- flashcards1
- git1
- handbook1
- presentation1
- scientific article1
- tool1
- tutorials1
- wiki1
- workflow1
- Show N_FILTERS more
- Related resource
- Associated Training Datasets332
- Associated Workflows307
- Jupyter Notebook (with Solutions)52
- Jupyter Notebook (without Solutions)52
- Input datasets32
- Associated slides9
- 2nd PaN EOSC Symposium6
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- Slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Booklet of presentations1
- Colloquia list1
- Contributing to the Galaxy Training Material slides1
- Documentation1
- Galaxy Server administration slides1
- Genome Annotation slides1
- ICAT search API implementation1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Jupyter Notebook1
- McStas1
- Overview of the Symposium1
- Part 101
- Part 2a1
- Part 2b1
- Part 31
- Part 41
- Part 51
- Part 61
- Part 71
- Part 81
- Part 91
- Recoding1
- Reference search API implementation1
- SciCat search API implementation1
- Scientific article1
- Statistics dataset1
- TELBE workflow1
- Transcriptomics slides1
- User Interface and Features dataset1
- Show N_FILTERS more
- Collection
- ELIXIR Biodiversity Community7
- PINK project5
- ELIXIR Federated Human Data Community4
- ELIXIR Systems Biology Community: training events and materials4
- ELIXIR SIS-Containers - collection of training materials2
- ELIXIR Toxicology Community2
- ELIXIR hCNV community - collection of courses and materials.1
- VIP138 SLOT Online Terbaik saat ini di Indonesia1
- Show N_FILTERS more
- Status
- Active132
- Show N_FILTERS more
Only show materials from current space
Show disabled materials
Show materials with broken links
Show archived materials

Training materials

User: scraper

and Across all spaces: true

9461 materials found

Results per page:

Filter

Sort

Filter Clear filters

Training materials

Querying SIB resources with SPARQL

Discussion: Guidelines for submitting data to ExperimentHub

HCA Data Access

BLAST and multiple sequence alignment (MSA) programs

Phylogenetics of animal pathogens: basic principles and applications

Single cell updates

Pitfalls and best practices for serializing Bioconductor objects

Introduction to DataFrames and the impact of recent changes

Evening session: Efficient R

Lab 9-1: Efficient and Parallel Evaluation