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Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

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Scientific topics: Transposons

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3 materials found
  • e-learning

    Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

    • Beginner
    Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
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    Bacterial Genome Annotation

    • Beginner
    Genomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod …
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    Essential genes detection with Transposon insertion sequencing

    • Beginner
    Genomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq
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TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.